Gene detail information of Glyur007803s00045656 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G45050.4 | 3.00E-26 | |
| NR | XP_007132570.1 | 5.21E-44 | hypothetical protein PHAVU_011G106000g [Phaseolus vulgaris] |
| COG | YP_003264995.1 | 6.00E-06 | TraB family protein [Haliangium ochraceum DSM 14365] |
| trEMBL | tr|V7AG78|V7AG78_PHAVU | 2.00E-44 | Uncharacterized protein {ECO:0000313|EMBL:ESW04564.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold07803 | 1660 | 3368 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.279 |
| SRR1783600 | control | 0.631 |
| SRR1783602 | moderate drought stress | 1.030 |
| SRR1811619 | moderate drought stress | 0.756 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.661 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.886 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.564 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.546 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.187 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.999 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.485 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.691 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.705 |
| SRR2868004 | Drought Stress (root) | 2.008 |
| SRR2967015 | Control (root) | 4.085 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.935 |
| SRR9715740 | Leaf | 1.739 |
| SRR9715741 | Leaf | 0.983 |
| SRR9715739 | Root | 0.134 |
| SRR9715742 | Root | 0.534 |
| SRR9715743 | Root | 0.628 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.332 |
| SRR8749028 | MeJA induced 9h | 2.612 |
| SRR8749029 | MeJA induced 9h | 4.590 |
| SRR8749030 | Uninduced | 9.895 |
| SRR8749031 | Uninduced | 3.476 |
| SRR8749032 | Uninduced | 5.477 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.006 |
| SRR8400027 | Control - Root | 1.118 |