Gene detail information of Glyur007787s00046115 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G23490.1 | 5.00E-07 | |
| NR | XP_003555542.1 | 1.55E-27 | PREDICTED: uncharacterized protein LOC100796032 isoform X1 [Glycine max] |
| trEMBL | tr|K7N4W2|K7N4W2_SOYBN | 6.00E-28 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G35770.6} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold07787 | 9 | 2244 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 15.244 |
| SRR1783600 | control | 15.375 |
| SRR1783602 | moderate drought stress | 17.518 |
| SRR1811619 | moderate drought stress | 17.196 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 12.375 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.924 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 16.147 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 15.707 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.699 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 12.164 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.441 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.018 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 22.737 |
| SRR2868004 | Drought Stress (root) | 26.406 |
| SRR2967015 | Control (root) | 29.432 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 13.747 |
| SRR9715740 | Leaf | 13.750 |
| SRR9715741 | Leaf | 16.823 |
| SRR9715739 | Root | 7.769 |
| SRR9715742 | Root | 23.478 |
| SRR9715743 | Root | 19.692 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.064 |
| SRR8749028 | MeJA induced 9h | 17.760 |
| SRR8749029 | MeJA induced 9h | 3.462 |
| SRR8749030 | Uninduced | 2.985 |
| SRR8749031 | Uninduced | 2.233 |
| SRR8749032 | Uninduced | 1.309 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 26.987 |
| SRR8400027 | Control - Root | 27.375 |