Gene detail information of Glyur007729s00043109.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G14220.28.00E-80Flavin containing amine oxidoreductase family
NRXP_004515432.13.30E-129PREDICTED: protoporphyrinogen oxidase, chloroplastic/mitochondrial-like [Cicer arietinum]
COGYP_003571277.12.00E-27protoporphyrinogen oxidase [Salinibacter ruber M8]
Swissprottr|Q8S9J1|PPOCM_ARATH1.00E-95Protoporphyrinogen oxidase 2, chloroplastic/mitochondrial (Precursor)
trEMBLtr|K7MXD0|K7MXD0_SOYBN2.00E-128Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G25100.2}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold07729832578-


Gene family

Gene familysubfamily
----


KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
K00231PPOX, hemYEC:1.3.3.4 1.3.3.15Porphyrin and chlorophyll metabolismmap00860
Porphyrin and chlorophyll metabolismmap00860


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0016491  oxidoreductase activity



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur007729s00043109.1PF01593.19Amino_oxidase802123.20E-05


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control15.162
SRR1783600control15.026
SRR1783602moderate drought stress18.798
SRR1811619moderate drought stress14.951

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain25.624
DRR006520Root Summer glycyrrhizin high producing strain24.411
DRR006521Root Winter glycyrrhizin high producing strain30.217
DRR006522Root Winter glycyrrhizin high producing strain32.315
DRR006523Root Summer glycyrrhizin low producing strain26.589
DRR006524Root Summer glycyrrhizin low producing strain25.729
DRR006525Leaf Summer glycyrrhizin high producing strain8.859
DRR006526Leaf Summer glycyrrhizin high producing strain9.337

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)27.343
SRR2868004Drought Stress (root)32.862
SRR2967015Control (root)30.159

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf9.374
SRR9715740Leaf12.841
SRR9715741Leaf14.324
SRR9715739Root5.297
SRR9715742Root12.243
SRR9715743Root11.403

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h46.067
SRR8749028MeJA induced 9h41.187
SRR8749029MeJA induced 9h33.785
SRR8749030Uninduced34.395
SRR8749031Uninduced32.961
SRR8749032Uninduced41.819

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root23.349
SRR8400027Control - Root28.131

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved