Gene detail information of Glyur007692s00044939 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | ACU19887.1 | 1.06E-16 | unknown [Glycine max] |
| trEMBL | tr|C6TDI5|C6TDI5_SOYBN | 4.00E-17 | Putative uncharacterized protein {ECO:0000313|EMBL:ACU19887.1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold07692 | 2498 | 3222 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.651 |
| SRR1783600 | control | 5.304 |
| SRR1783602 | moderate drought stress | 12.711 |
| SRR1811619 | moderate drought stress | 13.333 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 22.281 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 22.301 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 70.724 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 78.463 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 19.501 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 18.347 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 39.560 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 43.725 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.084 |
| SRR2868004 | Drought Stress (root) | 7.224 |
| SRR2967015 | Control (root) | 9.378 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 101.162 |
| SRR9715740 | Leaf | 161.398 |
| SRR9715741 | Leaf | 118.951 |
| SRR9715739 | Root | 59.729 |
| SRR9715742 | Root | 19.281 |
| SRR9715743 | Root | 30.011 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.713 |
| SRR8749028 | MeJA induced 9h | 1.353 |
| SRR8749029 | MeJA induced 9h | 0.947 |
| SRR8749030 | Uninduced | 0.168 |
| SRR8749031 | Uninduced | 0.285 |
| SRR8749032 | Uninduced | 10.268 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 17.256 |
| SRR8400027 | Control - Root | 9.799 |