Gene detail information of Glyur007690s00043317 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G35250.1 | 0 | NAD(P)-binding Rossmann-fold superfamily protein |
| NR | XP_004500690.1 | 0 | PREDICTED: uncharacterized protein ycf39-like [Cicer arietinum] |
| COG | YP_007091423.1 | 8.00E-119 | NmrA family protein [Chroococcidiopsis thermalis PCC 7203] |
| Swissprot | tr|P48279|YCF39_CYAPA | 6.00E-115 | Uncharacterized protein ycf39 |
| trEMBL | tr|I1JSB6|I1JSB6_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G00270.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold07690 | 103 | 3802 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur007690s00043317.1 | PF05368.8 | NmrA | 85 | 307 | 3.10E-25 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.706 |
| SRR1783600 | control | 8.874 |
| SRR1783602 | moderate drought stress | 13.369 |
| SRR1811619 | moderate drought stress | 13.273 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 13.208 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 13.282 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.920 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.891 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.753 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.929 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 157.057 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 156.435 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 25.312 |
| SRR2868004 | Drought Stress (root) | 26.524 |
| SRR2967015 | Control (root) | 27.627 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 127.898 |
| SRR9715740 | Leaf | 136.206 |
| SRR9715741 | Leaf | 104.241 |
| SRR9715739 | Root | 13.481 |
| SRR9715742 | Root | 10.124 |
| SRR9715743 | Root | 10.167 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 20.725 |
| SRR8749028 | MeJA induced 9h | 19.804 |
| SRR8749029 | MeJA induced 9h | 15.976 |
| SRR8749030 | Uninduced | 12.422 |
| SRR8749031 | Uninduced | 8.331 |
| SRR8749032 | Uninduced | 14.114 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 26.529 |
| SRR8400027 | Control - Root | 27.749 |