Gene detail information of Glyur007620s00047722 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G67150.1 | 2.00E-83 | HXXXD-type acyl-transferase family protein |
| NR | XP_004509128.1 | 0 | PREDICTED: uncharacterized acetyltransferase At3g50280-like [Cicer arietinum] |
| Swissprot | tr|Q9SND9|Y3028_ARATH | 2.00E-92 | Uncharacterized acetyltransferase At3g50280 |
| trEMBL | tr|I1K237|I1K237_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G18410.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold07620 | 2402 | 3799 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur007620s00047722.1 | PF02458.10 | Transferase | 4 | 462 | 3.20E-70 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.039 |
| SRR1783600 | control | 8.197 |
| SRR1783602 | moderate drought stress | 9.725 |
| SRR1811619 | moderate drought stress | 10.167 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.514 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.471 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.317 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.362 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 62.633 |
| SRR2868004 | Drought Stress (root) | 31.654 |
| SRR2967015 | Control (root) | 38.441 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.257 |
| SRR9715740 | Leaf | 0.017 |
| SRR9715741 | Leaf | 0.257 |
| SRR9715739 | Root | 11.486 |
| SRR9715742 | Root | 8.912 |
| SRR9715743 | Root | 8.009 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.890 |
| SRR8749028 | MeJA induced 9h | 7.790 |
| SRR8749029 | MeJA induced 9h | 2.167 |
| SRR8749030 | Uninduced | 3.213 |
| SRR8749031 | Uninduced | 0.264 |
| SRR8749032 | Uninduced | 0.426 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 11.190 |
| SRR8400027 | Control - Root | 12.389 |