Gene detail information of Glyur007613s00047795 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G27240.1 | 1.00E-110 | DNAJ heat shock N-terminal domain-containing protein |
| NR | XP_004495763.1 | 0 | PREDICTED: uncharacterized protein LOC101513909 [Cicer arietinum] |
| COG | YP_001740847.1 | 4.00E-11 | Chaperone protein DnaJ (Heat shock protein 40) (HSP40) [Candidatus Cloacimonas acidaminovorans str. Evry] |
| Swissprot | tr|Q9FH28|DNJ49_ARATH | 8.00E-11 | Chaperone protein dnaJ 49 |
| trEMBL | tr|K7N564|K7N564_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G37410.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold07613 | 739 | 2973 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur007613s00047795.1 | PF00226.26 | DnaJ | 68 | 129 | 9.30E-21 |
| Glyur007613s00047795.1 | PF11926.3 | DUF3444 | 458 | 666 | 1.90E-78 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.316 |
| SRR1783600 | control | 5.077 |
| SRR1783602 | moderate drought stress | 9.409 |
| SRR1811619 | moderate drought stress | 9.333 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.964 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.061 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.047 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.823 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.358 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.395 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.240 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.214 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.169 |
| SRR2868004 | Drought Stress (root) | 4.142 |
| SRR2967015 | Control (root) | 4.697 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.666 |
| SRR9715740 | Leaf | 0.666 |
| SRR9715741 | Leaf | 0.544 |
| SRR9715739 | Root | 1.243 |
| SRR9715742 | Root | 2.658 |
| SRR9715743 | Root | 2.739 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 18.401 |
| SRR8749028 | MeJA induced 9h | 7.888 |
| SRR8749029 | MeJA induced 9h | 7.403 |
| SRR8749030 | Uninduced | 1.522 |
| SRR8749031 | Uninduced | 1.543 |
| SRR8749032 | Uninduced | 1.270 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.941 |
| SRR8400027 | Control - Root | 5.424 |