Gene detail information of Glyur007612s00041744 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G34770.1 | 3.00E-81 | |
| NR | NP_001241280.1 | 1.88E-147 | uncharacterized protein LOC100813502 [Glycine max] |
| trEMBL | tr|C6T852|C6T852_SOYBN | 7.00E-148 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G15640.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold07612 | 1521 | 3956 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur007612s00041744.1 | PF01454.14 | MAGE | 25 | 209 | 1.40E-37 |
| Glyur007612s00041744.2 | PF01454.14 | MAGE | 25 | 168 | 1.80E-27 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.383 |
| SRR1783600 | control | 9.296 |
| SRR1783602 | moderate drought stress | 8.618 |
| SRR1811619 | moderate drought stress | 8.480 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 22.740 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 22.399 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 10.622 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 10.163 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 21.885 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 21.979 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.095 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.095 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.678 |
| SRR2868004 | Drought Stress (root) | 11.183 |
| SRR2967015 | Control (root) | 16.188 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.204 |
| SRR9715740 | Leaf | 6.905 |
| SRR9715741 | Leaf | 3.483 |
| SRR9715739 | Root | 4.100 |
| SRR9715742 | Root | 6.753 |
| SRR9715743 | Root | 8.896 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 22.963 |
| SRR8749028 | MeJA induced 9h | 14.119 |
| SRR8749029 | MeJA induced 9h | 11.364 |
| SRR8749030 | Uninduced | 6.156 |
| SRR8749031 | Uninduced | 1.532 |
| SRR8749032 | Uninduced | 3.945 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 19.309 |
| SRR8400027 | Control - Root | 15.538 |