Gene detail information of Glyur007584s00046841 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G38540.1 | 4.00E-25 | lipid transfer protein 1 |
| NR | XP_004514554.1 | 3.08E-42 | PREDICTED: non-specific lipid-transfer protein-like [Cicer arietinum] |
| Swissprot | tr|Q9M5X7|NLTP_MALDO | 3.00E-39 | Non-specific lipid-transfer protein (Precursor) |
| trEMBL | tr|I1JL08|I1JL08_SOYBN | 2.00E-41 | Non-specific lipid-transfer protein {ECO:0000256|RuleBase:RU000628} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold07584 | 1281 | 1953 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur007584s00046841.1 | PF00234.17 | Tryp_alpha_amyl | 28 | 112 | 1.20E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.108 |
| SRR1783600 | control | 0.107 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.342 |
| SRR2868004 | Drought Stress (root) | 0.106 |
| SRR2967015 | Control (root) | 0.333 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.964 |
| SRR9715740 | Leaf | 0.551 |
| SRR9715741 | Leaf | 1.206 |
| SRR9715739 | Root | 0.599 |
| SRR9715742 | Root | 0.611 |
| SRR9715743 | Root | 0.491 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.035 |
| SRR8400027 | Control - Root | 25.237 |