Gene detail information of Glyur007579s00046034 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G37790.1 | 7.00E-40 | Homeobox-leucine zipper protein family |
| NR | XP_003543728.1 | 1.79E-86 | PREDICTED: homeobox-leucine zipper protein HAT3-like [Glycine max] |
| Swissprot | tr|P46604|HAT22_ARATH | 3.00E-49 | Homeobox-leucine zipper protein HAT22 |
| trEMBL | tr|I1LVK0|I1LVK0_SOYBN | 7.00E-87 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G00310.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold07579 | 2006 | 3588 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | HB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur007579s00046034.1 | PF00046.24 | Homeobox | 83 | 137 | 8.60E-16 |
| Glyur007579s00046034.1 | PF02183.13 | HALZ | 139 | 174 | 4.30E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.577 |
| SRR1783600 | control | 6.305 |
| SRR1783602 | moderate drought stress | 4.058 |
| SRR1811619 | moderate drought stress | 4.222 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.082 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.051 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.771 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.338 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.335 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.361 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.832 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.716 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.346 |
| SRR2868004 | Drought Stress (root) | 5.578 |
| SRR2967015 | Control (root) | 6.230 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.019 |
| SRR9715740 | Leaf | 3.852 |
| SRR9715741 | Leaf | 2.946 |
| SRR9715739 | Root | 0.248 |
| SRR9715742 | Root | 4.135 |
| SRR9715743 | Root | 3.111 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.758 |
| SRR8749028 | MeJA induced 9h | 53.491 |
| SRR8749029 | MeJA induced 9h | 23.362 |
| SRR8749030 | Uninduced | 69.484 |
| SRR8749031 | Uninduced | 82.207 |
| SRR8749032 | Uninduced | 65.289 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 11.012 |
| SRR8400027 | Control - Root | 8.598 |