Gene detail information of Glyur007574s00047393 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_007140474.1 | 2.22E-35 | hypothetical protein PHAVU_008G115600g [Phaseolus vulgaris] |
| trEMBL | tr|V7B6J3|V7B6J3_PHAVU | 8.00E-36 | Uncharacterized protein {ECO:0000313|EMBL:ESW12468.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold07574 | 2522 | 2770 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.712 |
| SRR1783600 | control | 5.514 |
| SRR1783602 | moderate drought stress | 5.547 |
| SRR1811619 | moderate drought stress | 6.084 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.594 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.021 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 199.118 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 197.764 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.802 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 12.783 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.373 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.203 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 48.786 |
| SRR2868004 | Drought Stress (root) | 105.621 |
| SRR2967015 | Control (root) | 137.635 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.950 |
| SRR9715740 | Leaf | 2.636 |
| SRR9715741 | Leaf | 4.056 |
| SRR9715739 | Root | 3.803 |
| SRR9715742 | Root | 9.163 |
| SRR9715743 | Root | 9.875 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 95.618 |
| SRR8749028 | MeJA induced 9h | 117.837 |
| SRR8749029 | MeJA induced 9h | 160.051 |
| SRR8749030 | Uninduced | 60.368 |
| SRR8749031 | Uninduced | 155.447 |
| SRR8749032 | Uninduced | 341.189 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 66.847 |
| SRR8400027 | Control - Root | 32.098 |