Gene detail information of Glyur007541s00043596 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G08850.1 | 1.00E-64 | Leucine-rich repeat receptor-like protein kinase family protein |
| NR | XP_006602891.1 | 3.99E-149 | PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850-like isoform X2 [Glycine max] |
| COG | YP_643282.1 | 3.00E-20 | serine/threonine protein kinase [Rubrobacter xylanophilus DSM 9941] |
| Swissprot | tr|Q8VZG8|Y4885_ARATH | 2.00E-72 | Probable LRR receptor-like serine/threonine-protein kinase At4g08850 (Precursor) |
| trEMBL | tr|G7KZX2|G7KZX2_MEDTR | 1.00E-145 | LRR receptor-like kinase family protein {ECO:0000313|EMBL:AES77384.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold07541 | 3 | 2566 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | PPC:1.12.4 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur007541s00043596.1 | PF00069.20 | Pkinase | 57 | 303 | 1.00E-34 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.526 |
| SRR1783600 | control | 0.391 |
| SRR1783602 | moderate drought stress | 0.181 |
| SRR1811619 | moderate drought stress | 0.098 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.560 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.624 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.562 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.448 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.228 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.481 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.407 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.643 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.377 |
| SRR2868004 | Drought Stress (root) | 2.118 |
| SRR2967015 | Control (root) | 1.982 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.237 |
| SRR9715740 | Leaf | 6.482 |
| SRR9715741 | Leaf | 3.566 |
| SRR9715739 | Root | 4.004 |
| SRR9715742 | Root | 3.804 |
| SRR9715743 | Root | 3.820 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.096 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.059 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.106 |
| SRR8400027 | Control - Root | 2.538 |