Gene detail information of Glyur007537s00047510 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G48750.1 | 3.00E-23 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
| NR | XP_003555069.1 | 2.66E-34 | PREDICTED: probable non-specific lipid-transfer protein AKCS9-like [Glycine max] |
| Swissprot | tr|P82353|NLTP2_PRUAR | 4.00E-28 | Non-specific lipid-transfer protein 2 |
| trEMBL | tr|I1N5L5|I1N5L5_SOYBN | 1.00E-34 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G00710.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold07537 | 414 | 665 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur007537s00047510.1 | PF14368.1 | LTP_2 | 13 | 82 | 1.50E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 17.737 |
| SRR1783600 | control | 18.484 |
| SRR1783602 | moderate drought stress | 24.517 |
| SRR1811619 | moderate drought stress | 23.243 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 434.436 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 468.356 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.385 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.889 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 77.569 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 81.627 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1159.805 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1247.840 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 241.164 |
| SRR2868004 | Drought Stress (root) | 530.906 |
| SRR2967015 | Control (root) | 90.987 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 847.341 |
| SRR9715740 | Leaf | 1312.675 |
| SRR9715741 | Leaf | 875.874 |
| SRR9715739 | Root | 134.349 |
| SRR9715742 | Root | 395.902 |
| SRR9715743 | Root | 340.991 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.162 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 158.057 |
| SRR8400027 | Control - Root | 224.512 |