Gene detail information of Glyur007501s00046735 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_003613758.1 | 2.00E-75 | Disease resistance-like protein [Medicago truncatula] |
| trEMBL | tr|G7KDY8|G7KDY8_MEDTR | 7.00E-76 | Disease resistance protein (TIR-NBS-LRR class) {ECO:0000313|EMBL:AES96716.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold07501 | 2185 | 3613 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.727 |
| SRR1783600 | control | 0.703 |
| SRR1783602 | moderate drought stress | 1.457 |
| SRR1811619 | moderate drought stress | 1.445 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.157 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.159 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.227 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.530 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.157 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.020 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.520 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.279 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.018 |
| SRR2868004 | Drought Stress (root) | 18.077 |
| SRR2967015 | Control (root) | 11.743 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.692 |
| SRR9715740 | Leaf | 3.908 |
| SRR9715741 | Leaf | 10.684 |
| SRR9715739 | Root | 0.350 |
| SRR9715742 | Root | 1.938 |
| SRR9715743 | Root | 2.188 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.087 |
| SRR8749028 | MeJA induced 9h | 3.226 |
| SRR8749029 | MeJA induced 9h | 1.041 |
| SRR8749030 | Uninduced | 4.577 |
| SRR8749031 | Uninduced | 5.975 |
| SRR8749032 | Uninduced | 2.282 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.282 |
| SRR8400027 | Control - Root | 7.657 |