Gene detail information of Glyur007447s00046594 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G13970.1 | 2.00E-38 | |
| NR | KHN46848.1 | 7.41E-177 | hypothetical protein glysoja_015099 [Glycine soja] |
| trEMBL | tr|I1ML96|I1ML96_SOYBN | 2.00E-177 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA16G05220.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold07447 | 80 | 3712 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur007447s00046594.1 | PF15264.1 | TSSC4 | 254 | 330 | 6.20E-11 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 30.512 |
| SRR1783600 | control | 30.825 |
| SRR1783602 | moderate drought stress | 35.422 |
| SRR1811619 | moderate drought stress | 35.290 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 43.506 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 43.311 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 30.958 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 29.166 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 54.445 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 53.991 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 22.977 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 22.680 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 20.851 |
| SRR2868004 | Drought Stress (root) | 27.330 |
| SRR2967015 | Control (root) | 34.654 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 27.150 |
| SRR9715740 | Leaf | 27.267 |
| SRR9715741 | Leaf | 31.914 |
| SRR9715739 | Root | 8.013 |
| SRR9715742 | Root | 26.780 |
| SRR9715743 | Root | 24.061 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 100.103 |
| SRR8749028 | MeJA induced 9h | 72.096 |
| SRR8749029 | MeJA induced 9h | 112.453 |
| SRR8749030 | Uninduced | 81.352 |
| SRR8749031 | Uninduced | 116.338 |
| SRR8749032 | Uninduced | 108.168 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 23.704 |
| SRR8400027 | Control - Root | 23.871 |