Gene detail information of Glyur007403s00047386 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G35160.1 | 2.00E-36 | O-methyltransferase family protein |
| NR | XP_003601618.1 | 2.96E-80 | O-methyltransferase [Medicago truncatula] |
| COG | YP_001536889.1 | 6.00E-14 | O-methyltransferase family protein [Salinispora arenicola CNS-205] |
| Swissprot | tr|Q6WUC2|7OMT_PAPSO | 1.00E-32 | (R,S)-reticuline 7-O-methyltransferase |
| trEMBL | tr|G7JA41|G7JA41_MEDTR | 1.00E-80 | Flavonoid O-methyltransferase-like protein {ECO:0000313|EMBL:AES71869.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold07403 | 3790 | 4293 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur007403s00047386.1 | PF00891.13 | Methyltransf_2 | 27 | 168 | 1.20E-32 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 118.477 |
| SRR1783600 | control | 118.004 |
| SRR1783602 | moderate drought stress | 36.201 |
| SRR1811619 | moderate drought stress | 37.096 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 63.409 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 57.124 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.585 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.775 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.184 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.213 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 504.583 |
| SRR2868004 | Drought Stress (root) | 476.188 |
| SRR2967015 | Control (root) | 484.405 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.150 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.464 |
| SRR9715739 | Root | 34.200 |
| SRR9715742 | Root | 127.989 |
| SRR9715743 | Root | 99.416 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.107 |
| SRR8749029 | MeJA induced 9h | 0.166 |
| SRR8749030 | Uninduced | 0.219 |
| SRR8749031 | Uninduced | 0.859 |
| SRR8749032 | Uninduced | 0.198 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 259.257 |
| SRR8400027 | Control - Root | 249.836 |