Gene detail information of Glyur007373s00047829 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G45210.1 | 3.00E-34 | Protein of unknown function, DUF584 |
| NR | XP_003543482.1 | 1.71E-74 | PREDICTED: uncharacterized protein LOC100814909 [Glycine max] |
| trEMBL | tr|V7BW81|V7BW81_PHAVU | 2.00E-72 | Uncharacterized protein {ECO:0000313|EMBL:ESW22194.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold07373 | 2736 | 3296 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur007373s00047829.1 | PF04520.8 | Senescence_reg | 43 | 162 | 3.00E-38 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 14.839 |
| SRR1783600 | control | 16.377 |
| SRR1783602 | moderate drought stress | 11.451 |
| SRR1811619 | moderate drought stress | 10.733 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 24.138 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 25.609 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.888 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.741 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 42.244 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 44.246 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.733 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.592 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.910 |
| SRR2868004 | Drought Stress (root) | 19.795 |
| SRR2967015 | Control (root) | 43.795 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.893 |
| SRR9715740 | Leaf | 4.033 |
| SRR9715741 | Leaf | 3.848 |
| SRR9715739 | Root | 20.849 |
| SRR9715742 | Root | 14.378 |
| SRR9715743 | Root | 15.934 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.136 |
| SRR8749028 | MeJA induced 9h | 5.204 |
| SRR8749029 | MeJA induced 9h | 2.056 |
| SRR8749030 | Uninduced | 1.702 |
| SRR8749031 | Uninduced | 0.745 |
| SRR8749032 | Uninduced | 1.186 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.888 |
| SRR8400027 | Control - Root | 5.109 |