Gene detail information of Glyur007332s00046227.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G38670.1 | 6.00E-29 | phosphorylethanolamine cytidylyltransferase 1 |
| NR | AET05096.2 | 3.77E-50 | ethanolamine-phosphate cytidylyltransferase [Medicago truncatula] |
| COG | YP_004575814.1 | 2.00E-09 | cytidylyltransferase, partial [Methanothermococcus okinawensis IH1] |
| Swissprot | tr|Q9ZVI9|PECT1_ARATH | 1.00E-33 | Ethanolamine-phosphate cytidylyltransferase |
| trEMBL | tr|G7LIW8|G7LIW8_MEDTR | 1.00E-50 | Ethanolamine-phosphate cytidylyltransferase {ECO:0000313|EMBL:AET05096.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold07332 | 3 | 893 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K00967 | PCYT2 | EC:2.7.7.14 | Glycerophospholipid metabolism | map00564 |
| Phosphonate and phosphinate metabolism | map00440 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur007332s00046227.1 | PF01467.21 | CTP_transf_2 | 58 | 95 | 1.70E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.532 |
| SRR1783600 | control | 3.762 |
| SRR1783602 | moderate drought stress | 4.736 |
| SRR1811619 | moderate drought stress | 5.955 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.056 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.067 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 34.502 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 25.698 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 15.930 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 15.242 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.842 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 11.823 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.128 |
| SRR2868004 | Drought Stress (root) | 5.248 |
| SRR2967015 | Control (root) | 7.399 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.430 |
| SRR9715740 | Leaf | 5.644 |
| SRR9715741 | Leaf | 4.974 |
| SRR9715739 | Root | 1.226 |
| SRR9715742 | Root | 2.076 |
| SRR9715743 | Root | 2.633 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.082 |
| SRR8749028 | MeJA induced 9h | 2.368 |
| SRR8749029 | MeJA induced 9h | 2.921 |
| SRR8749030 | Uninduced | 0.756 |
| SRR8749031 | Uninduced | 4.078 |
| SRR8749032 | Uninduced | 5.149 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.363 |
| SRR8400027 | Control - Root | 10.349 |