Gene detail

Gene detail information of Glyur007305s00045332

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G17540.1	9.00E-131	HXXXD-type acyl-transferase family protein
NR	XP_003549135.1	0	PREDICTED: 13-hydroxylupanine O-tigloyltransferase-like [Glycine max]
Swissprot	tr\|Q5H873\|HLTT_LUPAL	0	13-hydroxylupanine O-tigloyltransferase
trEMBL	tr\|I1MQ63\|I1MQ63_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA16G32670.1}

Sequence

Transcript Sequence

>Glyur007305s00045332.1
CACTCTTTCTCTTCTTGCTTCTTGTCTTCTTGCTTCACATATAAAACATGGTTCTCCAAACTTCATCTCTAACATTTACAATAAGGAGGCACCCACATGAGCTTGTAGCCCCAGCTAACCACACCCCCCATGAGCTTAAGTTACTATCTGATTTAGATGACCAAAATGGACTACGTGCCGATATTCCATTAGTTTATTTATACCACTACCACCCTTCTATGGCAGGGAAAGACCCTGTTCAAGTCATTAGACAAGCACTTGCAAAAACACTTGTGTTCTATTATCCATTCGCCGGAAGGCTTAGGGAATTAAGTGATAGTGGGAAACTATTGGTGGATTGTACTGGAGAAGGTGTCATGTTCATTGAGGCTGATGCTGATGTCACACTTGAAGAGTTTGGCAACAATTTTATGCCTCCATTCCCTTGCTTTGATGAGCTCCTTTACAATGTTCCGGGTTCTGATGGAATAATTGATTGTCCTCTCTTGCTTGTACAGGTAACACGCCTCAAGTGTGGTGGTTTCATCTTTGCTCTTCGCATGAACCATACCATGAGTGATGGAGTTGGAATTTCCCAATTTCTAAAGGCCTTAGTAGAAATAGCAAGTGGGGCACAAAAGCCTTCCATTCTCCCAATATGGCATAGGGAGCTGCTATGTGCAAGAGACCCACCAAGAGTTACATGCATCCATAGGGAATACCAACAACTACAACCTGATAACAAGAGCATCTTTGAACCAACTCATCATTCCTTCTTCTTTGGCCCCAAAGAGATAGCTACAATCCGCGCTCTTCTCCCCCGTCGCCTTGTTGCTCAATCAACCTCCTTCGAGGTTCTCACTGCATGCCTCTGGCGCTGTCGTACAAAGGCATTGCAATGGCAAGATCCAAACCAAGAGGTTCGCTTGTTGTGCATTGTCAACGCACGTTATGGGCGTTGCCGGTCCAACCCTCCATTGCCTGAAGGGTTTTACGGCAATGCTTTTGTGTTTCCCGCGGCGGTTACCACCGTGGGAAAGCTCTGTGATCGCCCGTTAGGGTATGCCTTAGAGCTAGTGAGGAAGGCGAAGAACGAAGCAACTGAGGAGTATGTGCACTCGGTGGTGGACCTAATGGCCACTAAAGGAAGACCATGCTTCACTAGGTTAGGGTCTTTTATGGTATCGGATCTCTCAAAGGCTATGGTAGGAGATGTGAACTTTGGATGGGGAAAGCCTGTGTATGGTGGACTAGCTAAGGGTGGTCTTGGGGACATTCCAGGGGTGAGCTTTTATGTTCCCTTTACCAATTCCAAAGGAGAGCAAGGTAGAGTGGTCCCAATTTGTCTACCAGCAGATGCGATGGAAAGGTTTGGGAAAGAGTTGGATGACATGCTCAACACCAAGGCCAAGAACATTAACAACAATATAATATTGTCTAGTCTTTAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold07305	2078	4326	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur007305s00045332.1	PF02458.10	Transferase	11	442	1.20E-105

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.276
SRR1783600	control	0.302
SRR1783602	moderate drought stress	0.235
SRR1811619	moderate drought stress	0.211

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.151
DRR006520	Root Summer glycyrrhizin high producing strain	0.150
DRR006521	Root Winter glycyrrhizin high producing strain	14.111
DRR006522	Root Winter glycyrrhizin high producing strain	13.826
DRR006523	Root Summer glycyrrhizin low producing strain	0.000
DRR006524	Root Summer glycyrrhizin low producing strain	0.000
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.000
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.000

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.220
SRR2868004	Drought Stress (root)	0.248
SRR2967015	Control (root)	0.167

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.093
SRR9715740	Leaf	0.199
SRR9715741	Leaf	0.000
SRR9715739	Root	0.069
SRR9715742	Root	0.042
SRR9715743	Root	0.000

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	14.632
SRR8749028	MeJA induced 9h	49.056
SRR8749029	MeJA induced 9h	50.360
SRR8749030	Uninduced	266.500
SRR8749031	Uninduced	294.805
SRR8749032	Uninduced	929.790

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	0.675
SRR8400027	Control - Root	0.757