Gene detail information of Glyur007282s00047912 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G13950.1 | 1.00E-15 | |
| NR | AFK40766.1 | 2.84E-51 | unknown [Lotus japonicus] |
| trEMBL | tr|I3SKH4|I3SKH4_LOTJA | 1.00E-51 | Uncharacterized protein {ECO:0000313|EMBL:AFK40766.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold07282 | 3132 | 3761 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur007282s00047912.1 | PF13962.1 | PGG | 24 | 165 | 3.20E-14 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.369 |
| SRR1783600 | control | 0.408 |
| SRR1783602 | moderate drought stress | 0.054 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.187 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.256 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.810 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.030 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.443 |
| SRR2868004 | Drought Stress (root) | 35.594 |
| SRR2967015 | Control (root) | 13.117 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 8.473 |
| SRR9715740 | Leaf | 2.368 |
| SRR9715741 | Leaf | 17.511 |
| SRR9715739 | Root | 2.606 |
| SRR9715742 | Root | 3.859 |
| SRR9715743 | Root | 3.838 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.012 |
| SRR8749028 | MeJA induced 9h | 0.319 |
| SRR8749029 | MeJA induced 9h | 0.073 |
| SRR8749030 | Uninduced | 1.698 |
| SRR8749031 | Uninduced | 6.902 |
| SRR8749032 | Uninduced | 3.983 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.685 |
| SRR8400027 | Control - Root | 7.015 |