Gene detail information of Glyur007227s00047577 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G32390.3 | 6.00E-12 | glutamate receptor 3.5 |
| NR | XP_003593707.1 | 3.68E-50 | Glutamate receptor 3.2 [Medicago truncatula] |
| Swissprot | tr|Q9SW97|GLR35_ARATH | 7.00E-13 | Glutamate receptor 3.5 (Precursor) |
| trEMBL | tr|G7IK77|G7IK77_MEDTR | 3.00E-48 | Glutamate receptor 2.7 {ECO:0000313|EMBL:AES63959.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold07227 | 2044 | 2508 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.157 |
| SRR1783600 | control | 0.078 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.041 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.158 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.116 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.117 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.119 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.452 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.223 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.370 |
| SRR2868004 | Drought Stress (root) | 0.000 |
| SRR2967015 | Control (root) | 0.104 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.467 |
| SRR9715740 | Leaf | 0.723 |
| SRR9715741 | Leaf | 0.870 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.213 |
| SRR8749028 | MeJA induced 9h | 0.140 |
| SRR8749029 | MeJA induced 9h | 0.606 |
| SRR8749030 | Uninduced | 15.562 |
| SRR8749031 | Uninduced | 7.253 |
| SRR8749032 | Uninduced | 2.436 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.234 |
| SRR8400027 | Control - Root | 0.504 |