Gene detail information of Glyur007223s00040847 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_003617379.1 | 3.82E-14 | CCP [Medicago truncatula] |
| trEMBL | tr|G7K3B3|G7K3B3_MEDTR | 1.00E-14 | Disease resistance protein (TIR-NBS-LRR class) {ECO:0000313|EMBL:AET00338.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold07223 | 3908 | 4180 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.227 |
| SRR1783600 | control | 1.724 |
| SRR1783602 | moderate drought stress | 0.414 |
| SRR1811619 | moderate drought stress | 0.224 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.448 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.202 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.150 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.731 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.195 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.343 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.000 |
| SRR2868004 | Drought Stress (root) | 0.000 |
| SRR2967015 | Control (root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.329 |
| SRR9715740 | Leaf | 2.394 |
| SRR9715741 | Leaf | 0.983 |
| SRR9715739 | Root | 0.625 |
| SRR9715742 | Root | 3.542 |
| SRR9715743 | Root | 2.287 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.774 |
| SRR8400027 | Control - Root | 6.440 |