Gene detail information of Glyur007222s00046161 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G05700.1 | 4.00E-14 | Leucine-rich repeat transmembrane protein kinase protein |
| NR | KEH18240.1 | 8.04E-39 | LRR receptor-like kinase [Medicago truncatula] |
| Swissprot | tr|C0LGD6|Y1570_ARATH | 2.00E-15 | Probable LRR receptor-like serine/threonine-protein kinase At1g05700 (Precursor) |
| trEMBL | tr|A0A072TXH2|A0A072TXH2_MEDTR | 3.00E-39 | LRR receptor-like kinase {ECO:0000313|EMBL:KEH18240.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold07222 | 3590 | 4403 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur007222s00046161.1 | PF12819.2 | Malectin_like | 53 | 122 | 1.30E-16 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 1.358 |
| SRR1811619 | moderate drought stress | 1.207 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.250 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.993 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.175 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.889 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.722 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.901 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.470 |
| SRR2868004 | Drought Stress (root) | 3.152 |
| SRR2967015 | Control (root) | 5.413 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.417 |
| SRR8400027 | Control - Root | 1.654 |