Gene detail information of Glyur007219s00045920 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G13950.1 | 1.00E-12 | |
| NR | XP_004510422.1 | 3.68E-51 | PREDICTED: uncharacterized protein LOC101494327 [Cicer arietinum] |
| trEMBL | tr|I3SKH4|I3SKH4_LOTJA | 7.00E-48 | Uncharacterized protein {ECO:0000313|EMBL:AFK40766.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold07219 | 1605 | 2132 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur007219s00045920.1 | PF13962.1 | PGG | 20 | 161 | 8.40E-17 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 40.479 |
| SRR1783600 | control | 41.609 |
| SRR1783602 | moderate drought stress | 5.327 |
| SRR1811619 | moderate drought stress | 5.993 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 24.092 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 23.010 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 75.396 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 70.377 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 117.851 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 121.798 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.898 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.023 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.622 |
| SRR2868004 | Drought Stress (root) | 37.454 |
| SRR2967015 | Control (root) | 35.508 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 93.120 |
| SRR9715740 | Leaf | 11.027 |
| SRR9715741 | Leaf | 166.724 |
| SRR9715739 | Root | 65.152 |
| SRR9715742 | Root | 30.112 |
| SRR9715743 | Root | 35.835 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 57.320 |
| SRR8749028 | MeJA induced 9h | 53.300 |
| SRR8749029 | MeJA induced 9h | 41.312 |
| SRR8749030 | Uninduced | 288.410 |
| SRR8749031 | Uninduced | 649.803 |
| SRR8749032 | Uninduced | 241.172 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 44.180 |
| SRR8400027 | Control - Root | 60.588 |