Gene detail information of Glyur007199s00044930


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G10360.15.00E-97Ribosomal protein S6e
NRNP_001242564.15.96E-160uncharacterized protein LOC100801194 [Glycine max]
COGYP_001737450.11.00E-2030S ribosomal protein S6e [Candidatus Korarchaeum cryptofilum OPF8]
Swissprottr|Q9M3V8|RS6_ASPOF3.00E-15840S ribosomal protein S6
trEMBLtr|C6T2H6|C6T2H6_SOYBN2.00E-16040S ribosomal protein S6 {ECO:0000256|PIRNR:PIRNR002129}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold0719916794579+


Gene family

Gene familysubfamily
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KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
----------


Gene Ontology

biological_process

GO:0006412  translation


cellular_component

GO:0005622  intracellular

GO:0005840  ribosome


molecular_function

GO:0003735  structural constituent of ribosome

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur007199s00044930.1PF01092.14Ribosomal_S6e11281.60E-55


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control223.263
SRR1783600control226.743
SRR1783602moderate drought stress333.893
SRR1811619moderate drought stress323.704

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain385.467
DRR006520Root Summer glycyrrhizin high producing strain376.708
DRR006521Root Winter glycyrrhizin high producing strain163.245
DRR006522Root Winter glycyrrhizin high producing strain155.458
DRR006523Root Summer glycyrrhizin low producing strain515.060
DRR006524Root Summer glycyrrhizin low producing strain507.597
DRR006525Leaf Summer glycyrrhizin high producing strain93.301
DRR006526Leaf Summer glycyrrhizin high producing strain91.724

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)293.625
SRR2868004Drought Stress (root)216.651
SRR2967015Control (root)222.396

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf88.335
SRR9715740Leaf80.706
SRR9715741Leaf72.423
SRR9715739Root384.469
SRR9715742Root265.545
SRR9715743Root287.743

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h470.858
SRR8749028MeJA induced 9h257.611
SRR8749029MeJA induced 9h338.535
SRR8749030Uninduced61.996
SRR8749031Uninduced43.151
SRR8749032Uninduced93.685

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root275.557
SRR8400027Control - Root247.117

© 2021 Resource Institute for Chinese & Ethnic Materia Medica, Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved