Gene detail information of Glyur007193s00045770 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G46264.1 | 4.00E-33 | heat shock transcription factor B4 |
| NR | XP_007141514.1 | 1.73E-86 | hypothetical protein PHAVU_008G202500g [Phaseolus vulgaris] |
| Swissprot | tr|Q9C635|HSFB4_ARATH | 3.00E-41 | Heat stress transcription factor B-4 |
| trEMBL | tr|V7B9G3|V7B9G3_PHAVU | 6.00E-87 | Uncharacterized protein {ECO:0000313|EMBL:ESW13508.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold07193 | 197 | 4422 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.450 |
| SRR1783600 | control | 4.430 |
| SRR1783602 | moderate drought stress | 3.490 |
| SRR1811619 | moderate drought stress | 3.391 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.777 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.339 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.213 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.487 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.953 |
| SRR2868004 | Drought Stress (root) | 4.164 |
| SRR2967015 | Control (root) | 3.977 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.087 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.521 |
| SRR9715742 | Root | 0.478 |
| SRR9715743 | Root | 0.483 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.542 |
| SRR8400027 | Control - Root | 3.686 |