Gene detail information of Glyur007171s00046449 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G40100.1 | 8.00E-10 | Disease resistance protein (TIR-NBS-LRR class) family |
| NR | XP_003526343.1 | 0 | PREDICTED: TMV resistance protein N-like [Glycine max] |
| Swissprot | tr|Q40392|TMVRN_NICGU | 5.00E-09 | TMV resistance protein N |
| trEMBL | tr|K7KYE4|K7KYE4_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G46665.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold07171 | 1374 | 4027 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.370 |
| SRR1783600 | control | 1.504 |
| SRR1783602 | moderate drought stress | 1.934 |
| SRR1811619 | moderate drought stress | 1.912 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.619 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.798 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.522 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.562 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.389 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.842 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.674 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.802 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.360 |
| SRR2868004 | Drought Stress (root) | 4.207 |
| SRR2967015 | Control (root) | 2.939 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.193 |
| SRR9715740 | Leaf | 4.370 |
| SRR9715741 | Leaf | 0.472 |
| SRR9715739 | Root | 0.157 |
| SRR9715742 | Root | 0.901 |
| SRR9715743 | Root | 0.750 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.139 |
| SRR8749028 | MeJA induced 9h | 3.859 |
| SRR8749029 | MeJA induced 9h | 1.088 |
| SRR8749030 | Uninduced | 2.455 |
| SRR8749031 | Uninduced | 0.369 |
| SRR8749032 | Uninduced | 0.288 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.210 |
| SRR8400027 | Control - Root | 4.487 |