Gene detail information of Glyur007160s00045958 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G01650.1 | 3.00E-20 | Tautomerase/MIF superfamily protein |
| NR | KEH22850.1 | 4.38E-36 | macrophage migration inhibition factor-like protein [Medicago truncatula] |
| trEMBL | tr|A0A072UAN8|A0A072UAN8_MEDTR | 2.00E-36 | Macrophage migration inhibition factor-like protein {ECO:0000313|EMBL:KEH22850.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold07160 | 263 | 2304 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur007160s00045958.1 | PF01187.13 | MIF | 1 | 67 | 2.80E-10 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.841 |
| SRR1783600 | control | 0.846 |
| SRR1783602 | moderate drought stress | 6.062 |
| SRR1811619 | moderate drought stress | 5.645 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.219 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.703 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.796 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.198 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.085 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.330 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 55.523 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 51.118 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.804 |
| SRR2868004 | Drought Stress (root) | 3.364 |
| SRR2967015 | Control (root) | 4.289 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 71.463 |
| SRR9715740 | Leaf | 132.646 |
| SRR9715741 | Leaf | 75.960 |
| SRR9715739 | Root | 1.788 |
| SRR9715742 | Root | 4.692 |
| SRR9715743 | Root | 3.902 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.265 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.047 |
| SRR8749030 | Uninduced | 0.048 |
| SRR8749031 | Uninduced | 0.062 |
| SRR8749032 | Uninduced | 0.087 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.577 |
| SRR8400027 | Control - Root | 6.501 |