Gene detail

Gene detail information of Glyur007148s00046219

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G20450.1	2.00E-21	Ribosomal protein L14
NR	XP_003520056.1	1.65E-26	PREDICTED: probable 60S ribosomal protein L14-like [Glycine max]
Swissprot	tr\|Q9SIM4\|RL141_ARATH	8.00E-27	60S ribosomal protein L14-1
trEMBL	tr\|I1L7F3\|I1L7F3_SOYBN	6.00E-27	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA10G00680.1}

Sequence

Transcript Sequence

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold07148	2365	2975	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006412 translation

cellular_component

GO:0005622 intracellular

GO:0005840 ribosome

molecular_function
GO:0003735 structural constituent of ribosome

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Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur007148s00046219.1	PF01929.12	Ribosomal_L14e	21	61	7.70E-15

Expression pattern

SRA Experiment	Description	TPM
SRR1783599	control	1.933
SRR1783600	control	1.915
SRR1783602	moderate drought stress	0.983
SRR1811619	moderate drought stress	2.711

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	2.320
DRR006520	Root Summer glycyrrhizin high producing strain	0.979
DRR006521	Root Winter glycyrrhizin high producing strain	0.464
DRR006522	Root Winter glycyrrhizin high producing strain	1.314
DRR006523	Root Summer glycyrrhizin low producing strain	1.254
DRR006524	Root Summer glycyrrhizin low producing strain	0.675
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.284
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.208

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.897
SRR2868004	Drought Stress (root)	1.700
SRR2967015	Control (root)	0.585

SRA Experiment	Description	TPM
SRR9715738	Leaf	4.126
SRR9715740	Leaf	5.597
SRR9715741	Leaf	4.049
SRR9715739	Root	2.664
SRR9715742	Root	3.701
SRR9715743	Root	4.275

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.921
SRR8749028	MeJA induced 9h	0.516
SRR8749029	MeJA induced 9h	0.278
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.087
SRR8749032	Uninduced	0.126

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	4.424
SRR8400027	Control - Root	3.326