Gene detail information of Glyur007094s00045045 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G57230.1 | 5.00E-31 | Thioredoxin superfamily protein |
| NR | KHN26233.1 | 9.65E-45 | hypothetical protein glysoja_030430 [Glycine soja] |
| trEMBL | tr|C6SW31|C6SW31_SOYBN | 2.00E-44 | Putative uncharacterized protein {ECO:0000313|EMBL:ACU13454.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold07094 | 48 | 3883 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.246 |
| SRR1783600 | control | 2.299 |
| SRR1783602 | moderate drought stress | 3.092 |
| SRR1811619 | moderate drought stress | 2.929 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 14.044 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 13.452 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8.339 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.764 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.291 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.067 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 18.891 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 16.615 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.892 |
| SRR2868004 | Drought Stress (root) | 1.598 |
| SRR2967015 | Control (root) | 1.795 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.122 |
| SRR9715740 | Leaf | 1.106 |
| SRR9715741 | Leaf | 1.023 |
| SRR9715739 | Root | 0.448 |
| SRR9715742 | Root | 0.588 |
| SRR9715743 | Root | 0.831 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.784 |
| SRR8749028 | MeJA induced 9h | 1.919 |
| SRR8749029 | MeJA induced 9h | 4.245 |
| SRR8749030 | Uninduced | 3.125 |
| SRR8749031 | Uninduced | 4.429 |
| SRR8749032 | Uninduced | 3.662 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.038 |
| SRR8400027 | Control - Root | 1.066 |