Gene detail information of Glyur007040s00047147 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G59710.1 | 2.00E-22 | NAD(P)-binding Rossmann-fold superfamily protein |
| NR | XP_003520181.1 | 6.16E-49 | PREDICTED: (+)-neomenthol dehydrogenase-like [Glycine max] |
| COG | NP_923239.1 | 3.00E-14 | carbonyl reductase [Gloeobacter violaceus PCC 7421] |
| Swissprot | tr|Q9ZUH5|SDR2B_ARATH | 1.00E-18 | Short-chain dehydrogenase/reductase 2b |
| trEMBL | tr|I1JF07|I1JF07_SOYBN | 2.00E-49 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G15630.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold07040 | 4192 | 4655 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur007040s00047147.1 | PF00106.20 | adh_short | 25 | 104 | 3.50E-10 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.959 |
| SRR1783600 | control | 8.396 |
| SRR1783602 | moderate drought stress | 5.963 |
| SRR1811619 | moderate drought stress | 5.768 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.166 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.494 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.858 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.841 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.142 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.141 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 18.904 |
| SRR2868004 | Drought Stress (root) | 21.246 |
| SRR2967015 | Control (root) | 21.319 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.806 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 1.538 |
| SRR9715739 | Root | 4.118 |
| SRR9715742 | Root | 2.090 |
| SRR9715743 | Root | 1.861 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.055 |
| SRR8749028 | MeJA induced 9h | 0.598 |
| SRR8749029 | MeJA induced 9h | 1.431 |
| SRR8749030 | Uninduced | 0.409 |
| SRR8749031 | Uninduced | 0.543 |
| SRR8749032 | Uninduced | 1.851 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.822 |
| SRR8400027 | Control - Root | 7.918 |