Gene detail information of Glyur007008s00047563 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G52105.1 | 3.00E-18 | |
| NR | KHN19447.1 | 1.26E-32 | hypothetical protein glysoja_026062 [Glycine soja] |
| trEMBL | tr|G7LDN6|G7LDN6_MEDTR | 6.00E-33 | DIS3-exonuclease-like protein {ECO:0000313|EMBL:AET02183.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold07008 | 4061 | 4255 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.201 |
| SRR1783600 | control | 10.654 |
| SRR1783602 | moderate drought stress | 19.402 |
| SRR1811619 | moderate drought stress | 17.032 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 17.058 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 27.534 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 58.737 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 88.463 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 13.088 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 12.667 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.200 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.952 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.275 |
| SRR2868004 | Drought Stress (root) | 9.079 |
| SRR2967015 | Control (root) | 7.461 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 23.795 |
| SRR9715740 | Leaf | 29.612 |
| SRR9715741 | Leaf | 22.447 |
| SRR9715739 | Root | 15.735 |
| SRR9715742 | Root | 18.727 |
| SRR9715743 | Root | 21.635 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 31.315 |
| SRR8749028 | MeJA induced 9h | 67.984 |
| SRR8749029 | MeJA induced 9h | 36.030 |
| SRR8749030 | Uninduced | 3.019 |
| SRR8749031 | Uninduced | 5.377 |
| SRR8749032 | Uninduced | 7.319 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 29.237 |
| SRR8400027 | Control - Root | 16.530 |