Gene detail information of Glyur006990s00044217.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G11050.11.00E-56ferritin 2
NRXP_004491012.12.57E-107PREDICTED: ferritin-2, chloroplastic-like isoform X2 [Cicer arietinum]
COGYP_005081623.11.00E-13Ferritin [Pseudovibrio sp. FO-BEG1]
Swissprottr|Q41709|FRI2_VIGUN2.00E-103Ferritin-2, chloroplastic (Precursor)
trEMBLtr|G7K283|G7K283_MEDTR1.00E-106Ferritin {ECO:0000256|RuleBase:RU361145}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold069904444555-


Gene family

Gene familysubfamily
----


KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
K00522FTH1EC:1.16.3.2Mineral absorptionmap04978


Gene Ontology

biological_process

GO:0006826  iron ion transport

GO:0006879  cellular iron ion homeostasis


molecular_function

GO:0008199  ferric iron binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur006990s00044217.1PF00210.19Ferritin891971.40E-28


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control510.369
SRR1783600control498.847
SRR1783602moderate drought stress350.507
SRR1811619moderate drought stress353.290

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain321.492
DRR006520Root Summer glycyrrhizin high producing strain321.177
DRR006521Root Winter glycyrrhizin high producing strain313.445
DRR006522Root Winter glycyrrhizin high producing strain307.746
DRR006523Root Summer glycyrrhizin low producing strain276.114
DRR006524Root Summer glycyrrhizin low producing strain267.224
DRR006525Leaf Summer glycyrrhizin high producing strain125.110
DRR006526Leaf Summer glycyrrhizin high producing strain126.593

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)125.630
SRR2868004Drought Stress (root)72.036
SRR2967015Control (root)171.631

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf85.594
SRR9715740Leaf145.073
SRR9715741Leaf64.415
SRR9715739Root122.866
SRR9715742Root185.253
SRR9715743Root172.151

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h27.942
SRR8749028MeJA induced 9h32.497
SRR8749029MeJA induced 9h55.657
SRR8749030Uninduced23.994
SRR8749031Uninduced14.116
SRR8749032Uninduced25.705

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root338.110
SRR8400027Control - Root349.321

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved