Gene detail information of Glyur006947s00045292 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G49210.2 | 2.00E-32 | |
| NR | XP_004489116.1 | 8.91E-64 | PREDICTED: stress response protein NST1-like [Cicer arietinum] |
| trEMBL | tr|A0A067KIA2|A0A067KIA2_JATCU | 1.00E-53 | Uncharacterized protein {ECO:0000313|EMBL:KDP35837.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold06947 | 2115 | 4968 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.633 |
| SRR1783600 | control | 7.539 |
| SRR1783602 | moderate drought stress | 11.944 |
| SRR1811619 | moderate drought stress | 10.885 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 14.852 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 15.175 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 17.940 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 10.981 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 14.417 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 13.424 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.279 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.421 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.552 |
| SRR2868004 | Drought Stress (root) | 4.993 |
| SRR2967015 | Control (root) | 7.850 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.025 |
| SRR9715740 | Leaf | 5.810 |
| SRR9715741 | Leaf | 6.438 |
| SRR9715739 | Root | 1.260 |
| SRR9715742 | Root | 4.669 |
| SRR9715743 | Root | 3.119 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.028 |
| SRR8749028 | MeJA induced 9h | 6.715 |
| SRR8749029 | MeJA induced 9h | 6.272 |
| SRR8749030 | Uninduced | 4.646 |
| SRR8749031 | Uninduced | 2.829 |
| SRR8749032 | Uninduced | 13.496 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.870 |
| SRR8400027 | Control - Root | 3.734 |