Gene detail information of Glyur006928s00046307 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G32100.1 | 2.00E-53 | pinoresinol reductase 1 |
| NR | NP_001241029.1 | 1.32E-97 | uncharacterized protein LOC100786578 [Glycine max] |
| Swissprot | tr|P52581|IFRH_LUPAL | 8.00E-79 | Isoflavone reductase homolog |
| trEMBL | tr|C6TER4|C6TER4_SOYBN | 5.00E-98 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA16G17680.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold06928 | 61 | 1940 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur006928s00046307.1 | PF05368.8 | NmrA | 57 | 189 | 9.20E-42 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 49.207 |
| SRR1783600 | control | 58.070 |
| SRR1783602 | moderate drought stress | 34.081 |
| SRR1811619 | moderate drought stress | 39.197 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 12.760 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 14.725 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 74.461 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 75.516 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 21.430 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 22.928 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.372 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.493 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 88.651 |
| SRR2868004 | Drought Stress (root) | 100.305 |
| SRR2967015 | Control (root) | 86.600 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 22.755 |
| SRR9715740 | Leaf | 12.293 |
| SRR9715741 | Leaf | 38.804 |
| SRR9715739 | Root | 12.922 |
| SRR9715742 | Root | 43.599 |
| SRR9715743 | Root | 41.563 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 106.017 |
| SRR8749028 | MeJA induced 9h | 202.227 |
| SRR8749029 | MeJA induced 9h | 82.361 |
| SRR8749030 | Uninduced | 605.298 |
| SRR8749031 | Uninduced | 344.922 |
| SRR8749032 | Uninduced | 197.256 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 102.343 |
| SRR8400027 | Control - Root | 68.888 |