Gene detail information of Glyur006869s00046706 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G40095.1 | 2.00E-49 | Alpha/beta hydrolase related protein |
| NR | XP_004500482.1 | 1.86E-109 | PREDICTED: uncharacterized protein LOC101496112 isoform X2 [Cicer arietinum] |
| trEMBL | tr|G7JB79|G7JB79_MEDTR | 9.00E-107 | Alpha/beta hydrolase-like protein {ECO:0000313|EMBL:AES71131.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold06869 | 412 | 1334 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur006869s00046706.1 | PF10457.4 | MENTAL | 61 | 153 | 9.50E-05 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.279 |
| SRR1783600 | control | 3.199 |
| SRR1783602 | moderate drought stress | 3.104 |
| SRR1811619 | moderate drought stress | 3.035 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.619 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.564 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.912 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.802 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 31.852 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 32.085 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.146 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.277 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.264 |
| SRR2868004 | Drought Stress (root) | 32.799 |
| SRR2967015 | Control (root) | 41.465 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 43.142 |
| SRR9715740 | Leaf | 36.719 |
| SRR9715741 | Leaf | 84.090 |
| SRR9715739 | Root | 13.609 |
| SRR9715742 | Root | 19.546 |
| SRR9715743 | Root | 17.979 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.209 |
| SRR8749028 | MeJA induced 9h | 36.115 |
| SRR8749029 | MeJA induced 9h | 14.838 |
| SRR8749030 | Uninduced | 23.826 |
| SRR8749031 | Uninduced | 25.209 |
| SRR8749032 | Uninduced | 13.022 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 14.188 |
| SRR8400027 | Control - Root | 16.925 |