Gene detail information of Glyur006838s00047914 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G51670.1 | 1.00E-59 | Protein of unknown function (DUF668) |
| NR | XP_007152396.1 | 6.06E-132 | hypothetical protein PHAVU_004G126500g [Phaseolus vulgaris] |
| trEMBL | tr|V7C533|V7C533_PHAVU | 2.00E-132 | Uncharacterized protein {ECO:0000313|EMBL:ESW24390.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold06838 | 3147 | 4058 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur006838s00047914.1 | PF05003.7 | DUF668 | 127 | 215 | 2.90E-31 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.683 |
| SRR1783600 | control | 9.513 |
| SRR1783602 | moderate drought stress | 8.579 |
| SRR1811619 | moderate drought stress | 8.890 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 17.580 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 17.298 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.288 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.123 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.397 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.237 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.612 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.559 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.652 |
| SRR2868004 | Drought Stress (root) | 15.347 |
| SRR2967015 | Control (root) | 10.762 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.149 |
| SRR9715740 | Leaf | 2.592 |
| SRR9715741 | Leaf | 1.523 |
| SRR9715739 | Root | 19.863 |
| SRR9715742 | Root | 20.996 |
| SRR9715743 | Root | 16.267 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.621 |
| SRR8749028 | MeJA induced 9h | 6.993 |
| SRR8749029 | MeJA induced 9h | 3.841 |
| SRR8749030 | Uninduced | 4.217 |
| SRR8749031 | Uninduced | 4.016 |
| SRR8749032 | Uninduced | 3.447 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 16.962 |
| SRR8400027 | Control - Root | 16.795 |