Gene detail information of Glyur006833s00045931 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G58780.2 | 9.00E-30 | K-box region and MADS-box transcription factor family protein |
| NR | KHN48036.1 | 4.54E-41 | Floral homeotic protein AGAMOUS [Glycine soja] |
| Swissprot | tr|Q40168|AG_SOLLC | 4.00E-38 | Floral homeotic protein AGAMOUS |
| trEMBL | tr|I1KSJ1|I1KSJ1_SOYBN | 6.00E-41 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G12730.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold06833 | 2816 | 3076 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | M-type |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur006833s00045931.1 | PF00319.13 | SRF-TF | 34 | 84 | 5.30E-30 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 11.193 |
| SRR1783600 | control | 10.423 |
| SRR1783602 | moderate drought stress | 15.823 |
| SRR1811619 | moderate drought stress | 14.905 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.930 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.502 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.622 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.785 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.132 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.519 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.029 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.030 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.932 |
| SRR2868004 | Drought Stress (root) | 4.714 |
| SRR2967015 | Control (root) | 7.747 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.745 |
| SRR9715740 | Leaf | 1.532 |
| SRR9715741 | Leaf | 3.222 |
| SRR9715739 | Root | 0.093 |
| SRR9715742 | Root | 1.101 |
| SRR9715743 | Root | 1.781 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.936 |
| SRR8749028 | MeJA induced 9h | 7.101 |
| SRR8749029 | MeJA induced 9h | 3.350 |
| SRR8749030 | Uninduced | 1.824 |
| SRR8749031 | Uninduced | 2.359 |
| SRR8749032 | Uninduced | 0.947 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.365 |
| SRR8400027 | Control - Root | 7.881 |