Gene detail information of Glyur006832s00047527 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G47200.1 | 2.00E-26 | WPP domain protein 2 |
| NR | XP_004499018.1 | 3.64E-57 | PREDICTED: MFP1 attachment factor 1-like [Cicer arietinum] |
| Swissprot | tr|Q9M7N6|MAF1_SOLLC | 3.00E-45 | MFP1 attachment factor 1 |
| trEMBL | tr|V7AWX5|V7AWX5_PHAVU | 1.00E-53 | Uncharacterized protein {ECO:0000313|EMBL:ESW08716.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold06832 | 4419 | 4847 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur006832s00047527.1 | PF13943.1 | WPP | 29 | 122 | 3.50E-40 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 178.982 |
| SRR1783600 | control | 180.489 |
| SRR1783602 | moderate drought stress | 117.538 |
| SRR1811619 | moderate drought stress | 116.508 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 97.155 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 93.882 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 33.840 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 32.040 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 50.999 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 55.913 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 71.794 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 72.286 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 88.418 |
| SRR2868004 | Drought Stress (root) | 57.889 |
| SRR2967015 | Control (root) | 56.290 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 56.345 |
| SRR9715740 | Leaf | 41.947 |
| SRR9715741 | Leaf | 38.572 |
| SRR9715739 | Root | 138.918 |
| SRR9715742 | Root | 79.973 |
| SRR9715743 | Root | 84.372 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 196.800 |
| SRR8749028 | MeJA induced 9h | 52.133 |
| SRR8749029 | MeJA induced 9h | 80.498 |
| SRR8749030 | Uninduced | 31.551 |
| SRR8749031 | Uninduced | 15.301 |
| SRR8749032 | Uninduced | 27.426 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 127.652 |
| SRR8400027 | Control - Root | 104.840 |