Gene detail information of Glyur006769s00047931 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | NP_001237767.1 | 2.24E-52 | Bowman-Birk type protease inhibitor-like precursor [Glycine max] |
| Swissprot | tr|Q41066|IBB2_PEA | 3.00E-33 | Seed trypsin/chymotrypsin inhibitor TI5-72 (Precursor) |
| trEMBL | tr|B1ACD4|B1ACD4_SOYBN | 8.00E-53 | Putative Bowman-Birk type protease inhibitor {ECO:0000313|EMBL:ACA23206.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold06769 | 3774 | 4148 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur006769s00047931.1 | PF00228.15 | Bowman-Birk_leg | 64 | 88 | 1.90E-08 |
| Glyur006769s00047931.1 | PF00228.15 | Bowman-Birk_leg | 90 | 114 | 2.80E-11 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 36.544 |
| SRR1783600 | control | 37.958 |
| SRR1783602 | moderate drought stress | 156.983 |
| SRR1811619 | moderate drought stress | 164.016 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.080 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.399 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.288 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.584 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 159.775 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 161.152 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 149.998 |
| SRR2868004 | Drought Stress (root) | 98.253 |
| SRR2967015 | Control (root) | 127.700 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 945.000 |
| SRR9715740 | Leaf | 890.093 |
| SRR9715741 | Leaf | 346.643 |
| SRR9715739 | Root | 9.202 |
| SRR9715742 | Root | 105.224 |
| SRR9715743 | Root | 88.468 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.152 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.285 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.169 |
| SRR8749032 | Uninduced | 0.645 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.826 |
| SRR8400027 | Control - Root | 57.384 |