Gene detail information of Glyur006737s00045894 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G60240.2 | 7.00E-51 | eukaryotic translation initiation factor 4G |
| NR | XP_004492237.1 | 4.05E-87 | PREDICTED: eukaryotic translation initiation factor 4G-like isoform X1 [Cicer arietinum] |
| Swissprot | tr|B9FXV5|IF4G_ORYSJ | 4.00E-67 | Eukaryotic translation initiation factor 4G |
| trEMBL | tr|K7LAK1|K7LAK1_SOYBN | 1.00E-86 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G45425.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold06737 | 4789 | 5271 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur006737s00045894.1 | PF02854.14 | MIF4G | 1 | 156 | 3.10E-37 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.122 |
| SRR1783600 | control | 4.237 |
| SRR1783602 | moderate drought stress | 5.584 |
| SRR1811619 | moderate drought stress | 5.433 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.550 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.419 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.721 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.716 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 14.371 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 13.083 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.541 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.755 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 18.498 |
| SRR2868004 | Drought Stress (root) | 23.478 |
| SRR2967015 | Control (root) | 28.406 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.404 |
| SRR9715740 | Leaf | 0.431 |
| SRR9715741 | Leaf | 1.160 |
| SRR9715739 | Root | 0.244 |
| SRR9715742 | Root | 1.307 |
| SRR9715743 | Root | 0.733 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 10.973 |
| SRR8749028 | MeJA induced 9h | 3.184 |
| SRR8749029 | MeJA induced 9h | 6.125 |
| SRR8749030 | Uninduced | 1.367 |
| SRR8749031 | Uninduced | 1.288 |
| SRR8749032 | Uninduced | 0.650 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.026 |
| SRR8400027 | Control - Root | 5.619 |