Gene detail information of Glyur006737s00045893 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G60240.2 | 2.00E-16 | eukaryotic translation initiation factor 4G |
| NR | XP_007140754.1 | 1.56E-29 | hypothetical protein PHAVU_008G139000g [Phaseolus vulgaris] |
| Swissprot | tr|B9FXV5|IF4G_ORYSJ | 3.00E-21 | Eukaryotic translation initiation factor 4G |
| trEMBL | tr|V7B7B8|V7B7B8_PHAVU | 6.00E-30 | Uncharacterized protein {ECO:0000313|EMBL:ESW12748.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold06737 | 3399 | 4756 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.267 |
| SRR1783600 | control | 1.151 |
| SRR1783602 | moderate drought stress | 2.023 |
| SRR1811619 | moderate drought stress | 2.203 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.133 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.047 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.762 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.488 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.636 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.046 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.743 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.539 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.309 |
| SRR2868004 | Drought Stress (root) | 7.329 |
| SRR2967015 | Control (root) | 9.861 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.920 |
| SRR9715740 | Leaf | 0.361 |
| SRR9715741 | Leaf | 0.890 |
| SRR9715739 | Root | 0.224 |
| SRR9715742 | Root | 0.779 |
| SRR9715743 | Root | 1.229 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.524 |
| SRR8749028 | MeJA induced 9h | 0.320 |
| SRR8749029 | MeJA induced 9h | 0.829 |
| SRR8749030 | Uninduced | 0.032 |
| SRR8749031 | Uninduced | 0.051 |
| SRR8749032 | Uninduced | 0.246 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.247 |
| SRR8400027 | Control - Root | 2.423 |