Gene detail information of Glyur006703s00045322 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G46495.1 | 8.00E-04 | RING/U-box superfamily protein |
| NR | XP_003589643.1 | 7.62E-73 | Stress-induced receptor-like kinase [Medicago truncatula] |
| trEMBL | tr|G7I974|G7I974_MEDTR | 3.00E-73 | Wall-associated receptor kinase galacturonan-binding protein {ECO:0000313|EMBL:AES59894.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold06703 | 4401 | 5234 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur006703s00045322.1 | PF13947.1 | GUB_WAK_bind | 36 | 114 | 1.60E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.044 |
| SRR1783602 | moderate drought stress | 0.046 |
| SRR1811619 | moderate drought stress | 0.079 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.564 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.381 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.647 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.166 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.748 |
| SRR2868004 | Drought Stress (root) | 4.785 |
| SRR2967015 | Control (root) | 2.355 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 39.645 |
| SRR9715740 | Leaf | 27.358 |
| SRR9715741 | Leaf | 79.853 |
| SRR9715739 | Root | 0.089 |
| SRR9715742 | Root | 1.588 |
| SRR9715743 | Root | 0.300 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.157 |
| SRR8749029 | MeJA induced 9h | 0.126 |
| SRR8749030 | Uninduced | 0.179 |
| SRR8749031 | Uninduced | 0.023 |
| SRR8749032 | Uninduced | 0.033 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.687 |
| SRR8400027 | Control - Root | 0.526 |