Gene detail

Gene detail information of Glyur006649s00041320

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G67720.1	2.00E-107	Leucine-rich repeat protein kinase family protein
NR	KHN24106.1	0	Putative LRR receptor-like serine/threonine-protein kinase [Glycine soja]
COG	YP_004579826.1	4.00E-12	hypothetical protein [Lacinutrix sp. 5H-3-7-4]
Swissprot	tr\|C0LGI2\|Y1677_ARATH	1.00E-138	Probable LRR receptor-like serine/threonine-protein kinase At1g67720 (Precursor)
trEMBL	tr\|K7MPC0\|K7MPC0_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA18G01450.2}

Sequence

Transcript Sequence

>Glyur006649s00041320.1
AATTTTGTCAATGCATTTGGCTCCTTGTCTGATGAAATCATCGTCAAGAACGAAGGCGATCCCTGCATTCCAACTCCCTGGGAATGGGTAAATTGTAGTACCACTACACCTCCAAGAATTACAAAAATAAACCTGTCAAGAAGGAATGTCAAGGGTGAAATCCCGCATGAGCTCAACAACATGGAAGCCTTGACAGAATTGTGGTTAGATGGAAACTTGCTTACAGGACAATTACCTGACATGAGCAATCTTGTCAATCTAAAGATTGTGCATCTAGAGAACAACAAATTGACTGGTCCACTACCATCTTACCTGGGTAGTTTGCCAAGTTTACAAGCACTGTTCATACAGAATAACTCATTTACTGGGGAAATACCAGCAGGATTGGTATCTGGAAAAATCATTTTCAACTATGATAATAATCCTGGACTACGTAGAGGGAACAAAAAGCATTTTCAGTTGATGCTAGGAGTTTCTATTGGAGTACTGGTGATTCTATTAATCTTATTCTTAGGAAGTTTGATGTTATTGCATAATCTGCGGAGAAAAGCATCGCGACAGAAACATGATGAAAAAGGACGCAGTAGCACTAGACCTTTAACCGGATACTCTTCTGTTCGGGGTGGGAATTTAATGGATGAAGGTACTGCATACTACATTACTCTCCCGGAATTGAAAGAAGCTACTAATAATTTTTCAAAGCAAATTGGGAAAGGAAGCTTTGGATCTGTCTATTATGGGAAAATGAGAGATGGAAAAGAGGTGGCGGTTAAGACTATGACCGATCCGTCCAGCCACGGGAACCAGCAATTTGTAAATGAGGTAGCCCTCCTGTCAAGAATTCATCACAGAAACTTGGTTCCTCTGATTGGATATTGTGAAGAAGAATATCAACATATTCTTGTTTATGAGTATATGCACAATGGAACTCTAAGGGATCACATTCATGGTTGTTCGAATCAGAAGCCATTTGACTGGTTAGCTCGCCTACGAATAGCAGAAGATGCCGCTAAAGTTGTTCTGCTGGAACTGATATCTGGAAAAAAGCCTGTATCATCAGAAGATTATGGCCCCGAAATGAATATCGTTCACTGGGCAAGATCCTTAATTCGTAAAGGGGATGTAGTTAGTATTATGGATCCTTTCCTAATTGGGAATGTCAAAACTGAGTCAACTTGGAGGGTTGCTGAAATTGCCATGCAATGTGTAGAACCACATGGTGCCTCCAGGCCAAGGATGCAAGAAGTCATTTTGGCTATACAAGATGCTTCTAAGATAGAGAAAGGGACAGAAACTCAGCTAAAATCATCATCCTCAGGTGATTCAAAACCACAGTCTTCAAGGAAAACTTTACTTACAAGCTTCCTTGAAATTGAGAGCCCTGACTTATCAAGTGGTTGCCTCCCATCAGCAAGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold06649	98	3501	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.8.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur006649s00041320.1	PF07714.12	Pkinase_Tyr	232	337	1.80E-19

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	19.697
SRR1783600	control	19.759
SRR1783602	moderate drought stress	15.299
SRR1811619	moderate drought stress	15.510

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	26.188
DRR006520	Root Summer glycyrrhizin high producing strain	25.488
DRR006521	Root Winter glycyrrhizin high producing strain	10.828
DRR006522	Root Winter glycyrrhizin high producing strain	11.671
DRR006523	Root Summer glycyrrhizin low producing strain	19.074
DRR006524	Root Summer glycyrrhizin low producing strain	19.180
DRR006525	Leaf Summer glycyrrhizin high producing strain	8.628
DRR006526	Leaf Summer glycyrrhizin high producing strain	8.286

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	15.014
SRR2868004	Drought Stress (root)	12.752
SRR2967015	Control (root)	14.497

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	6.634
SRR9715740	Leaf	5.666
SRR9715741	Leaf	5.157
SRR9715739	Root	2.280
SRR9715742	Root	10.551
SRR9715743	Root	11.941

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.318
SRR8749028	MeJA induced 9h	0.127
SRR8749029	MeJA induced 9h	0.187
SRR8749030	Uninduced	0.932
SRR8749031	Uninduced	0.621
SRR8749032	Uninduced	0.686

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	21.661
SRR8400027	Control - Root	26.471