Gene detail information of Glyur006638s00047814 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G44100.1 | 1.00E-20 | amino acid permease 5 |
| NR | XP_003603642.1 | 3.23E-41 | Amino acid permease [Medicago truncatula] |
| Swissprot | tr|Q8GUM3|AAP5_ARATH | 6.00E-24 | Amino acid permease 5 |
| trEMBL | tr|G7J3I6|G7J3I6_MEDTR | 1.00E-40 | Transmembrane amino acid transporter family protein {ECO:0000313|EMBL:AES73893.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold06638 | 3792 | 4025 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur006638s00047814.1 | PF01490.13 | Aa_trans | 1 | 67 | 1.60E-11 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 12.729 |
| SRR1783600 | control | 11.181 |
| SRR1783602 | moderate drought stress | 18.249 |
| SRR1811619 | moderate drought stress | 16.305 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 20.964 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 17.320 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.851 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.952 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 12.425 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 13.104 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.880 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.163 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.565 |
| SRR2868004 | Drought Stress (root) | 4.127 |
| SRR2967015 | Control (root) | 4.486 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.335 |
| SRR9715740 | Leaf | 0.209 |
| SRR9715741 | Leaf | 0.158 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.441 |
| SRR9715743 | Root | 0.100 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.264 |
| SRR8400027 | Control - Root | 0.176 |