Gene detail information of Glyur006631s00043311 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G13920.1 | 9.00E-12 | Remorin family protein |
| NR | XP_004505377.1 | 1.32E-77 | PREDICTED: uncharacterized protein LOC101493550 isoform X1 [Cicer arietinum] |
| trEMBL | tr|G7JHG5|G7JHG5_MEDTR | 1.00E-73 | Carboxy-terminal region remorin {ECO:0000313|EMBL:AES89982.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold06631 | 394 | 2792 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur006631s00043311.1 | PF03763.8 | Remorin_C | 249 | 293 | 5.10E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.948 |
| SRR1783600 | control | 1.935 |
| SRR1783602 | moderate drought stress | 1.657 |
| SRR1811619 | moderate drought stress | 1.688 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.931 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.865 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.349 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.176 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.787 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.710 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.577 |
| SRR2868004 | Drought Stress (root) | 11.994 |
| SRR2967015 | Control (root) | 10.736 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.366 |
| SRR9715740 | Leaf | 0.621 |
| SRR9715741 | Leaf | 2.126 |
| SRR9715739 | Root | 0.213 |
| SRR9715742 | Root | 3.745 |
| SRR9715743 | Root | 2.525 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.638 |
| SRR8749028 | MeJA induced 9h | 0.093 |
| SRR8749029 | MeJA induced 9h | 0.553 |
| SRR8749030 | Uninduced | 0.100 |
| SRR8749031 | Uninduced | 0.222 |
| SRR8749032 | Uninduced | 0.705 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.659 |
| SRR8400027 | Control - Root | 3.283 |