Gene detail information of Glyur006626s00046047 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G37970.1 | 6.00E-33 | SOUL heme-binding family protein |
| NR | XP_004506644.1 | 7.23E-56 | PREDICTED: heme-binding-like protein At3g10130, chloroplastic-like [Cicer arietinum] |
| COG | YP_006416023.1 | 9.00E-10 | SOUL heme-binding protein [Thiocystis violascens DSM 198] |
| trEMBL | tr|G7JRA5|G7JRA5_MEDTR | 7.00E-49 | SOUL heme-binding family protein {ECO:0000313|EMBL:AES87018.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold06626 | 3850 | 4245 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur006626s00046047.1 | PF04832.7 | SOUL | 44 | 129 | 8.90E-22 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.715 |
| SRR1783600 | control | 2.535 |
| SRR1783602 | moderate drought stress | 3.833 |
| SRR1811619 | moderate drought stress | 4.206 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.906 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.055 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 120.856 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 113.506 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.960 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.069 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 28.909 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 25.498 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.809 |
| SRR2868004 | Drought Stress (root) | 34.349 |
| SRR2967015 | Control (root) | 30.923 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 21.239 |
| SRR9715740 | Leaf | 20.310 |
| SRR9715741 | Leaf | 36.725 |
| SRR9715739 | Root | 3.872 |
| SRR9715742 | Root | 18.774 |
| SRR9715743 | Root | 15.815 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.898 |
| SRR8749028 | MeJA induced 9h | 51.724 |
| SRR8749029 | MeJA induced 9h | 36.428 |
| SRR8749030 | Uninduced | 16.549 |
| SRR8749031 | Uninduced | 13.425 |
| SRR8749032 | Uninduced | 69.948 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 14.088 |
| SRR8400027 | Control - Root | 9.791 |