Gene detail information of Glyur006626s00046046 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G37970.1 | 5.00E-16 | SOUL heme-binding family protein |
| NR | NP_001235669.1 | 4.01E-30 | uncharacterized protein LOC100499762 [Glycine max] |
| trEMBL | tr|I1JLU7|I1JLU7_SOYBN | 8.00E-31 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G14980.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold06626 | 3248 | 3817 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur006626s00046046.1 | PF04832.7 | SOUL | 1 | 65 | 6.20E-14 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.600 |
| SRR1783600 | control | 0.501 |
| SRR1783602 | moderate drought stress | 0.992 |
| SRR1811619 | moderate drought stress | 1.722 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.511 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.071 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 115.997 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 106.659 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.376 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.298 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 25.920 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 29.999 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.179 |
| SRR2868004 | Drought Stress (root) | 0.966 |
| SRR2967015 | Control (root) | 0.622 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 12.712 |
| SRR9715740 | Leaf | 14.844 |
| SRR9715741 | Leaf | 21.859 |
| SRR9715739 | Root | 2.848 |
| SRR9715742 | Root | 10.444 |
| SRR9715743 | Root | 11.116 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.054 |
| SRR8749028 | MeJA induced 9h | 0.616 |
| SRR8749029 | MeJA induced 9h | 0.097 |
| SRR8749030 | Uninduced | 0.283 |
| SRR8749031 | Uninduced | 0.287 |
| SRR8749032 | Uninduced | 0.707 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.624 |
| SRR8400027 | Control - Root | 4.534 |