Gene detail

Gene detail information of Glyur006594s00044330

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G17430.1	1.00E-06	Seven transmembrane MLO family protein
NR	XP_007156260.1	9.36E-33	hypothetical protein PHAVU_003G271300g [Phaseolus vulgaris]
Swissprot	tr\|O22752\|MLO7_ARATH	1.00E-08	MLO-like protein 7
trEMBL	tr\|V7CDQ7\|V7CDQ7_PHAVU	3.00E-33	MLO-like protein {ECO:0000256\|RuleBase:RU280816}

Sequence

Transcript Sequence

>Glyur006594s00044330.1
AACTGCAACAGCAGCAGCTTCCCTCAGATGGCCAACGCCTCAGCCATAATGGGGCTAGTACCGGGGAATTTCTTTGTAAGTCCAAAAACCACCTCTCCCCTCCAATCTCTAGCAATGATTCCAGCACTTCCAATCTGCCTTTGCAGGTTAAACCCTGCATCTGTGTTAATTTTGACTGTGTTTCTCCTTGGAGGGCGCCAATAGTTATTATATCTGCTTCTGAGAACTGGCTGACTCTGCTGCTCCCACTTTGCTGAAATACACTACAAGTTTGCAACCGCTTTCATGGCCTCTCAATGGCGGCGCTATGCTCACCCAGTAGAACAGTTACCGCACTCTTTCACCAACTTGGCCATGGGCTTCCTTGTGACCTCGTGGTGGCCTTTTGCTTCCCGACCATGATTCTCGGCTTTCTCGCGAGCCTCCACGCAATGACCTTCTCACCTCTGGATCATCCCTTATCTAGATGGATGGGCTCAAGAATGAAGAAACCAATATTTGATGAACAAATATCACAAGCGTTAAAACAATGGCACAAGGATGTGAAAATGAAGCTAAGGCTGAAACTTGGGAAGTCCAGTGTGAGAACCATGGATGGAAGCACCATTGATTCAACGGTGCACTCTTCCAGCCCCATGCTACACCGTTTCAGTACTAGCAGTAGCTCGACTCGCACGATGTCAATCTATAGGGACCAAGACAAAGATAATTACCAATCAGCTGATACAGAATTGTCTCCCATATCACCAACTTCAAACCTGATAGTAAGAGTGGATCAGGTCACTCGCAAGCAATTGTTCATCACCGGCCAAGAAGAAAATCCTTTGCCTTCTTTTCAAAAATACTCATTGAGAAGGAGAACTACTGAAAAAACGTGCCCTTCTTTTCAGAAAAACCCATTCAGATATAGAGAGAAGGAAAAGGGGGAGGGTAGTCACAAACCCTAACCTTCTTAGAAAAGCTGTGCGAGGCAGCACGAGGGAGAGAGTCGGAGAGCTGCAGCGGCTGAGGTTGAAGGAGTAAAGGAGAAAGAGATAAGAAAAAGGAAGACAGTGGGTGTTTGGATTTTTTCCTACTGCGGGGAGCGAGCAGTAGGTGATTCGACGTTGGGTCACTCGCGCTACAGTGGTTTGAGGGTGGATTGGGGACCACCCACCCGGTTGCTTCCTATGCTTCTCGACTGAGCTTGGCTGCAGTGGACTCACACCGGTTCACAGTGGCTGTTGCAGTTAGATACCTTCTTTTTTGTTTTTGTATTTACTTGCTTTGGTGGCTGTATTTGTTTTTCATTGATGGCTGTATTATTTATCCAGCGAAAGTTGTCTTAGTTGCATTTTACAGCATTTTTAATAAACAAAAGGGATGAATTTGTTGATAAAGTACTGATGCAACAAGAAGAGAAGCAAAAGTTGTTATGACTGGGATAATTACAATGGATTTTTGTTGCCTAGGTTCTTCACTTATTGTGTAAGTTCCTTTCCGAAAAGTATTTTTCTCTGTTGATTTTTATGCAGTTAACAAGAAGTAATTGAAAAAGGCATCTCTAG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold06594	52	5507	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006952 defense response

cellular_component
GO:0016021 integral component of membrane

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur006594s00044330.1	PF03094.10	Mlo	55	114	1.70E-09

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.878
SRR1783600	control	0.901
SRR1783602	moderate drought stress	0.763
SRR1811619	moderate drought stress	0.767

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	3.238
DRR006520	Root Summer glycyrrhizin high producing strain	3.114
DRR006521	Root Winter glycyrrhizin high producing strain	1.025
DRR006522	Root Winter glycyrrhizin high producing strain	1.087
DRR006523	Root Summer glycyrrhizin low producing strain	2.244
DRR006524	Root Summer glycyrrhizin low producing strain	2.455
DRR006525	Leaf Summer glycyrrhizin high producing strain	2.606
DRR006526	Leaf Summer glycyrrhizin high producing strain	2.652

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	4.727
SRR2868004	Drought Stress (root)	4.579
SRR2967015	Control (root)	4.126

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.113
SRR9715740	Leaf	0.192
SRR9715741	Leaf	0.214
SRR9715739	Root	0.098
SRR9715742	Root	0.132
SRR9715743	Root	0.131

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.880
SRR8749028	MeJA induced 9h	0.311
SRR8749029	MeJA induced 9h	0.411
SRR8749030	Uninduced	0.750
SRR8749031	Uninduced	0.576
SRR8749032	Uninduced	1.350

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	0.860
SRR8400027	Control - Root	0.720