Gene detail information of Glyur006581s00047325 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G27200.1 | 6.00E-07 | Cupredoxin superfamily protein |
| NR | AFK34398.1 | 6.06E-22 | unknown [Lotus japonicus] |
| Swissprot | tr|Q41001|BCP_PEA | 1.00E-07 | Blue copper protein (Precursor) |
| trEMBL | tr|I3S2A6|I3S2A6_LOTJA | 2.00E-22 | Uncharacterized protein {ECO:0000313|EMBL:AFK34398.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold06581 | 348 | 506 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 19.154 |
| SRR1783600 | control | 17.502 |
| SRR1783602 | moderate drought stress | 12.792 |
| SRR1811619 | moderate drought stress | 11.002 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.323 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.215 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.445 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.232 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.660 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.786 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 612.017 |
| SRR2868004 | Drought Stress (root) | 416.745 |
| SRR2967015 | Control (root) | 380.454 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 211.476 |
| SRR9715740 | Leaf | 143.226 |
| SRR9715741 | Leaf | 236.207 |
| SRR9715739 | Root | 69.381 |
| SRR9715742 | Root | 50.178 |
| SRR9715743 | Root | 54.126 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 151.086 |
| SRR8749028 | MeJA induced 9h | 79.717 |
| SRR8749029 | MeJA induced 9h | 59.197 |
| SRR8749030 | Uninduced | 317.883 |
| SRR8749031 | Uninduced | 79.765 |
| SRR8749032 | Uninduced | 59.777 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 306.373 |
| SRR8400027 | Control - Root | 147.648 |